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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs56680862 chr14:36087086 T/TA 5.58E-6 484 15.93 16.35 8.33 KM Plot
THCA rs56708826 chr3:53963709 G/A 0 485 15.83 17.6 6.03 KM Plot
THCA rs567346 chr1:74780385 C/T 1.02E-9 480 15.7 16.67 6.9 KM Plot
THCA rs56738625 chr1:91803041 A/G 8.05E-6 488 15.7 17 17.77 KM Plot
THCA rs56806329 chr19:43584987 A/G 0.000256 485 15.32 18.3 10.08 KM Plot
THCA rs56895036 chr6:119120693 C/T 0.000273 483 16.23 14.25 21.77 KM Plot
THCA rs56913673 chr13:24891736 A/C 0.000317 486 15.17 17.77 17.08 KM Plot
THCA rs56920802 chr14:36224476 T/C 5.07E-6 490 16.08 15.98 8.33 KM Plot
THCA rs57008152 chr19:43581658 G/A 0.000256 485 15.32 18.3 10.08 KM Plot
THCA rs570278 chr19:39632813 C/G 1.63E-6 490 15.9 15.17 19.53 KM Plot
THCA rs57110040 chr2:28990202 C/G 0.000151 490 15.32 18.13 14.3 KM Plot
THCA rs57116423 chr2:237970180 G/A 0.000149 484 15.68 16.47 16.48 KM Plot
THCA rs57153202 chr2:29041324 AAAAG/A 9.62E-5 489 15.9 17.08 14.98 KM Plot
THCA rs571593 chr11:104904298 G/A 1.76E-6 487 15.93 16.4 11.47 KM Plot
THCA rs5716 chr16:20796387 C/G 3.8E-10 490 14.3 14.95 15.97 KM Plot